You have SIBO: Take these antibiotics and call me in two weeks. Can we do better?


The antibiotic approach to SIBO...


A reasonable approach to Small Intestinal Bacterial Overgrowth (SIBO) treatment? Perhaps.


Effective long term? Probably not.


So, the question is not “should I take Rifaximin or Neomycin/Rifaximin or plant antimicrobials?” Which I go into detail on this blog. The question is what should I do after I take them? Because we all know of the infamous likelihood of a SIBO relapse.


To dive into this question, we should look at the factors that lead to SIBO:


Intrinsic factors that prevent bacterial overgrowth (Ghoshal, Shukla, & Ghoshal, 2017)

1. Secretion of gastric juice and bile which have antibacterial effects. Basically, proper stomach acid and gallbladder function.

2. Peristaltic movement preventing adherence into the intestinal mucosa. Basically, regular bowel movement.

3. Normal gut defense including humoral and cellular mechanisms. Basically, adequate immune defenses in the gut such as proper Secretory IgA levels.

4. Mucin production by intestinal mucosal epithelial cell inhibiting pathogenic bacterial. Basically, an intact gut lining.

5. Gut antibacterial peptides such as defensins.

6. A patent ileocecal valve preventing retrograde translocation of bacteria from the colon to the small intestine.

7. A well-functioning migrating motor complex (this runs during the interdigestive/fasting period between meals) every 90 or so minutes.

8. There are other factors to consider which I blogged about here.

Your clinician should be able to hunt down which of the risk factors you have for SIBO and plan to work on reversing them or supporting these areas after the antimicrobial phase of treatment

How SIBO causes problems?


Short Chain Fatty acids which are created by the fermentation of certain carbohydrates and starches by colonic bacteria provide nutrients for the colonocytes, conservation of energy and absorption of water and electrolytes. However, in the small bowel the production of SCFA's and fermentative biproducts should not be happening in large amounts. In SIBO, this fermentation is often excessive.


So, in the small bowel, short chain fatty acids production may affect the gastrointestinal tract by:


1. Inhibiting nutrient absorption


2. Inhibiting Jejunal motility (via the ileal brake) via the liberation of Peptide YY, neurotensin, glucagon peptide-1 which further promotes SIBO.


Basically, this means the middle part of the small intestine gets sluggish and bacterial builds up instead of moving through.


3. Enhancing cell wall breakdown releasing bacterial cell contents like lipopolysaccharide (LPS) (LPS) derived from Gram negative bacteria hanging out in the gastrointestinal tract may also affect motility.


4. increasing bacterial derived metabolites which may affect colonic motility i.e.; Formyl-methionyl-leucyl-phenylalanine may affect the enteric nervous system.


This is the nervous system of the gut that may be disrupted by the biproducts of bacteria hanging out in large amounts where they shouldn't be.Ghoshal et al., 2017)


Bacterial overgrowth produces a lot of toxic compounds.


1. Peptidoglycans

2. D-lactate

3. Serum amyloid A

(Ghoshal et al., 2017)


All of these may promote inflammation, damage the brush border of the enterocytes (gut cells) and increase small intestinal permeability. Oh, and effect moods like creating lowered moods, anxiety, or brain fog.


The net result is some people have no digestive symptoms with SIBO and yet feel achy and depressed. But most have bloating, gas, constipation and/or diarrhea and also mood changes.


An adequate SIBO treatment should address brain/gut repair and address the underlying cause and mechanism of the SIBO process.


So as we can see an antibiotic approach in small intestinal overgrowth may temporarily change the environment and create some stability, but how did we get here in the first place? Those questions must be answered and addressed in a complete SIBO treatment.





Dr Rinde has been treating and lecturing about SIBO since 2007 after reading. This book changed his practice to addressing functional digestive disorders, Dr. Rinde gave his first lecture on SIBO at Grand Rounds at Bastyr University in 2007 and since has lectured and taught continuing education on the subject. He is available for interviews, consults, and lectures

#SIBO #Smallintestinalbacterialovergowth #Irritablebowelsyndrome

Featured Posts